We also identified lncRNAs that were known to be cell-type specific including SCHLAP1 enriched in prostate cancer cells (Fig. 1e, avg_log2FC = 4.3, FDR = 5.6 × 10−73) and SMIM25 enriched in monocyte/macrophage cells (Fig. 1e, avg_log2FC = 6.71, FDR = 1.7 × 10−137)18,21. The gene discussed is SCHLAP1; the disease is prostate cancer.