Three samples of pancreatic cancer (n = 9) presented variants in genes other than TP53. In ovarian cancer deletions, which lead to a frameshift in the open reading frame, occurred in potentially targetable HR genes RAD51D (OvCa_1), NBN (OvCa_24), BRIP1 (OvCa_32) and FANCL (OvCa_65), besides deletions in BRCA1/2 and TP53. Here, FANCL is linked to ovarian cancer.