Our analysis pinpointed nine genetic markers in the APOE gene region and four loci mapped to the CDK11, OBP2B, TPM1, and SMARCA4 genes, which demonstrated associations with AD at p ≤ 5 × 10−4 and pleiotropic associations at p ≤ 5 × 10−8. Here, SMARCA4 is linked to Alzheimer disease.