PTEN and acute lymphoblastic leukemia: The non-ETP T-ALL blasts had high enrichment of cell differentiation processes (Additional file 2: Fig. S11B), and near-ETP/ETP overexpressed genes linked to transcription regulation and/or structural organization processes (Additional file 2: Fig. S11C) such as PTEN, TNIK, and AUTS2 (Fig. 3E).