We found that adding probiotic therapies could reduce the levels of alanine aminotransferase [mean difference (MD): −11.76 (−16.06, −7.46), p < 0.00001], aspartate aminotransferase (MD: −9.08 (−13.60, −4.56), p < 0.0001], γ-glutamyltransferase [MD: −5.67 (−6.80, −4.54), p < 0.00001] and homeostasis model assessment–insulin resistance [MD: −0.62 (−1.08, −0.15), p = 0.01], in patients with MAFLD compared with those in control individuals. The gene discussed is GPT; the disease is Insulin resistance.