The members of the modules were significantly enriched with several biological processes such as deubiquitination, protein modifications, cell cycle, neddylation, and transcription; signaling pathways such as PI3K-Akt, NOTCH, and Wnt signaling; cancer pathways such as transcriptional misregulation of cancer and microRNAs in cancer; and cancer pathways associated with oncogenic viruses such as Hepatitis B, Human papillomavirus (HPV), Epstein-Barr virus, and Human T-cell leukemia virus 1 (Figure 2A, Supplementary Tables S2, S3). Here, AKT1 is linked to cancer.