Using the networkD3 R package, we revealed some highly connected subnetworks among autophagy proteins, including heat shock protein family A (Hsp70) member 8 (HSPA8), Parkinson’s disease (autosomal recessive, early onset) 7 (PARK7), tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide, isoform CRA_b (YWHAH), integrin beta-3 (ITGB3) and colony-stimulating factor 1 receptor (CSF1R). Here, CSF1R is linked to Parkinson disease.