In HNSCC of the larynx (Supplementary Figs. 10, 11, Table 3E/F), CDKN2A, BCL6, TP63, GSK3B and NDRG1 were altered in both WT and MUT; CSNK2A1 and CREBBP were downregulated in WT, whereas the same resulted upregulated in MUT. Here, CSNK2A1 is linked to head and neck squamous cell carcinoma.