We compared the overlap of microglial modules to known schizophrenia, ASD, and intellectual disability risk genes, two de novo mutated gene sets in ASD patients, synaptic molecules, interacting partners of fragile X mental retardation protein (FMRP) and microglia modules from RNA-seq studies of ASD brains (Fig. 2f and Supplementary Table 2) using hypergeometric distribution analysis. The gene discussed is FMR1; the disease is schizophrenia.