CLPTM1L and lung cancer: We ran the SNPs through the pipeline and identified six germline-regulated genes from the GWAS Catalog SNPs: CHRNA5, CLPTM1L, PSMA4, RP11-650 L12.2, TP63, and ZSCAN29. We examined the overlap between these genes and our germline-regulated genes by lung cancer subtype in the above subsections.