In the CUT condition, numerous genes involved in RNA processing and RNA regulation were found at 3 and 4 dai, whereas genes related to the perception and the regulation of plant response to biotic or abiotic stresses (i.e., leucine rich repeat protein, NBS-LRR protein, Cystein rich receptor like kinase protein, cytochrome P450) and protein degradation were mostly found at later stages of infection (Table S6, Figure 4A). Here, NYX is linked to infection.