We applied BaalChIP to 548 ENCODE samples [19] obtained from a panel of 14 cell lines, representing different tissues and karyotypes, including eight cancer cell lines (HeLa-S3, A549, MCF-7, T-47D, K562, HepG2, SK-N-SH, and HL-60) and six non-cancer cell lines (H1-hESC, GM12878, GM12891, GM12892, MCF10A-Er-Src, and IMR90), as well as six FAIRE-seq samples obtained from breast cancer cell lines (MDA-MB-134 and T-47D) (Additional file 3: Table S2 and Additional file 4: Table S3). Here, SRC is linked to cancer.