JUND and autoimmune disease: Gene ontology analysis of the JunD-bound genes in the different strains and states identified marked similarities between the enriched terms in basal WKY BMDMs (Additional file 2: Table S3) and WKY.LCrgn2 BMDMs (Additional file 2: Table S4) as well as LPS stimulated WKY.LCrgn2 BMDMs (Additional file 2: Table S5) covering multiple autoimmune disease pathways and core macrophage functions such as antigen processing.