The only SNPs associated with risk for PR-negative breast cancer were SNPs at 6q25.1 (per-allele HR = 1.19, 95% CI: 1.11 to 1.27, P-trend = 3.7 × 10-7), and in LSP1 (per-allele HR = 1.09, 95% CI: 1.01 to 1.16, P-trend = 0.017), but these were not significantly different from the associations with PR-positive breast cancer for BRCA1 mutation carriers. Here, LSP1 is linked to breast cancer.